Background: Multiple sclerosis (MS) is a common central nervous system autoimmune disorder. Increasing number of genome-wide association study (GWAS) analyses hint that MS is strongly associated with genetics. Unfortunately, almost all the GWAS analyses were Caucasian population based. Numbers of risk loci might not be replicated in Chinese MS patients. Hence, we performed a MassArray Assay to genotype the previously reported variants located in the transcription regulation genes in order to elucidate their role in the Chinese MS patients. Methods: One hundred and forty-two relapsing-remitting MS (RRMS) patients and 301 healthy controls were consecutively collected from September 2, 2008, to June 7, 2013, as stage 1 subjects. Eight reported transcription regulation-related single-nucleotide polymorphisms (SNPs) were genotyped using the Sequenom MassArray system. In stage 2, another 44 RRMS patients and 200 healthy controls were consecutively collected and Sanger sequenced from April 7, 2015, to June 29, 2017, for the validation of positive results in stage 1. Differences in allele and genotype frequencies between patients and healthy controls, odds ratios, and 95% confidence intervals were calculated with the Chi-square test or Fisher's exact test. Hardy-Weinberg equilibrium was tested also using the Chi-square test. Results: In stage 1 analysis, we confirmed only one previously reported risk variant, rs 11129295 in EOMES gene. We found that the frequency of T/T genotype was much higher in MS group (chi(2) = 10.251, P = 0.005) and the T allele of rs 11129295 increased the risk of MS (chi(2) = 10.022, P = 0.002). In stage 2 and combined analyses, the T allele of rs 11129295 still increased the risk of MS (chi(2) = 4.586, P = 0.030 and chi(2) = 16.378, P = 5.19 x 10(-5), respectively). Conclusions: This study enhances the knowledge that the variant of EOMES is associated with increasing risk in Chinese RRMS patients and provides a potential therapeutic target in RRMS.
[1]Fudan Univ, Huashan Hosp, Dept Neurol, Shanghai 200040, Peoples R China.
[2]Zhejiang Univ, Affiliated Hosp 2, Key Lab Med Neurobiol Zhejiang Prov, Dept Neurol,Sch Med, Hangzhou 310009, Zhejiang, Peoples R China.
[3]Zhejiang Univ, Affiliated Hosp 2, Key Lab Med Neurobiol Zhejiang Prov, Res Ctr Neurol,Sch Med, Hangzhou 310009, Zhejiang, Peoples R China.
[4]Fujian Med Univ, Affiliated Hosp 1, Dept Neurol, Fuzhou 350005, Fujian, Peoples R China.
[5]Fujian Med Univ, Affiliated Hosp 1, Inst Neurol, Fuzhou 350005, Fujian, Peoples R China.
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