首页 / 院系成果 / 成果详情页

3DScapeCS: application of three dimensional, parallel, dynamic network visualization in Cytoscape 期刊论文

编号：

85765fe0-1072-401a-9fd7-fd88f07d56b0
作者：

Wang, Qi^[1,4] Tang, Biao^[2] Song, Lifu^[3] Ren, Biao^[1,4] Liang, Qun^[4] Xie, Feng^[1] Zhuo, Ying^[1] Liu, Xueting^[1] Zhang, Lixin^[1]
语种：

English
期刊：

BMC BIOINFORMATICS ISSN：1471-2105 2013 年 14 卷 ; NOV 14
收录：
摘要：

Background: The exponential growth of gigantic biological data from various sources, such as protein-protein interaction (PPI), genome sequences scaffolding, Mass spectrometry (MS) molecular networking and metabolic flux, demands an efficient way for better visualization and interpretation beyond the conventional, two-dimensional visualization tools. Results: We developed a 3D Cytoscape Client/Server (3DScapeCS) plugin, which adopted Cytoscape in interpreting different types of data, and UbiGraph for three-dimensional visualization. The extra dimension is useful in accommodating, visualizing, and distinguishing large-scale networks with multiple crossed connections in five case studies. Conclusions: Evaluation on several experimental data using 3DScapeCS and its special features, including multilevel graph layout, time-course data animation, and parallel visualization has proven its usefulness in visualizing complex data and help to make insightful conclusions.
推荐引用方式
GB/T 7714：

Wang Qi,Tang Biao,Song Lifu, et al. 3DScapeCS: application of three dimensional, parallel, dynamic network visualization in Cytoscape [J].BMC BIOINFORMATICS,2013,14.
APA：

Wang Qi,Tang Biao,Song Lifu,Ren Biao,&Zhang Lixin.(2013).3DScapeCS: application of three dimensional, parallel, dynamic network visualization in Cytoscape .BMC BIOINFORMATICS,14.
MLA：

Wang Qi, et al. "3DScapeCS: application of three dimensional, parallel, dynamic network visualization in Cytoscape" .BMC BIOINFORMATICS 14(2013).

浏览次数：13  下载次数：0

分享到：

浏览次数：13

下载次数：0

打印次数：0